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BIOC-PHD - Biochemistry (PhD)
Overview
Program Overview
Office: Beckman Center, B400
Mail Code: 94305-5307
Phone: (650) 723-6161
Web Site: https://biochemistry.stanford.edu/
Biochemistry is a department within the School of Medicine, with offices and labs in the Beckman Center for Molecular and Genetic Medicine at the Stanford Medical Center, the Shriram Center for Bioengineering and Chemical Engineering, and the Stanford Genome Technology Center. Undergraduates and graduate and medical school students may take courses the department offers.
The Department of Biochemistry focuses on the molecular basis of life by studying the structures and functions of proteins and nucleic acids, the control of development, molecular motors and the cytoskeleton, trafficking of proteins between organelles, regulation of gene expression, protein homeostasis, structure and design, genetic and epigenetic control of chromosome function, and the application of genomics, all toward the understanding of health and disease. Advanced courses in more specialized areas emphasize the most recent developments in biochemistry, biophysics, cell biology, and molecular biology. These courses include the physical chemistry of proteins and nucleic acids, membrane biology and biochemistry, the cytoskeleton, mechanisms and regulation of nucleic acid replication and recombination, the biochemistry of bacterial and animal viruses, the molecular basis of morphogenesis, and the structure and function of both eukaryotic and prokaryotic chromosomes.
The Department of Biochemistry offers a PhD program that begins in autumn quarter of each year. The program of study is designed to prepare students for productive careers in biochemistry; its emphasis is training in research, and each student works closely with faculty members. Opportunities exist for directed reading and research in biochemistry and molecular biology using the most advanced research facilities, including those for light and electron microscopy, chromatography and electrophoresis, protein and nucleic acid purification, rapid kinetic analysis, synthesis and analysis, single-molecule analyses using laser light traps, microarray generation and analysis, and computer graphic workstation facilities for protein and nucleic acid structural analysis. Ongoing research uses a variety of organisms, from bacteria to animal cells.
Those applying for graduate study should have at least a baccalaureate degree and complete work in cell and developmental biology, basic biochemistry and molecular biology, and genetics. Also required are: at least one year of university physics; differential and integral calculus; and organic, inorganic, and physical chemistry. The department is especially interested in applicants with research experience in biology or chemistry. Students must apply, including transcripts and letters of recommendation, by December for admission in the following autumn quarter.
Applications should be submitted at the Office of Graduate Admissions website. Applicants are notified by March 31 of decisions on their applications. The Biochemistry Department has made scores from the general Graduate Record Examination (GRE) (verbal, quantitative, and analytical) optional on our application.
All applicants are urged to compete for non-Stanford fellowships or scholarships, and U.S. citizens should complete an application for a National Science Foundation Predoctoral Traineeship. Students receive financial support to cover ordinary living expenses; Stanford tuition costs are paid. Applicants for admission to the department are considered regardless of race, color, creed, religion, sex, age, national origin, or marital status.
Postdoctoral research training is available to graduates with a PhD or an MD degree. Qualified individuals may write to individual faculty members for further information.
Director of Graduate Studies
Free Form Requisites
Students graduating with a PhD in Biochemistry from Stanford are expected to be generally proficient in four core scientific areas relevant to biochemical research and the specific scientific areas most relevant to their particular thesis projects. The four core proficiency areas are:
Quantitative Biochemistry and Biophysics
Genetics
Molecular Biology
Cell Biology
Proficiency can be demonstrated by successfully completing graduate-level courses in each of these four areas or by other means with the permission of the graduate advisor.
In addition to the requirement for a PhD dissertation based on original research, students must complete six advanced courses in biochemistry and related areas among the 135 total units required for the Ph.D. The selection of these courses is tailored to fit the background and interests of each student.
A second requirement involves the submission of two research proposals. The student presents these proposals to a small committee of departmental faculty members responsible for monitoring the progress of student curricular and research programs and a journal club presentation. All PhD students must participate actively in the department’s seminar program. Students are encouraged to attend and present papers at regional and national meetings in cellular biochemistry and molecular biology. Teaching experience is an integral part of the PhD curriculum and is required for the degree. The Department of Biochemistry offers only an MS to students already enrolled in the PhD program. Students should contact the Graduate Studies advisor for more details.
Program Policies
External Credit Policies
The Biochemistry department will allow up to the University limit of 45 units of graduate level course work to apply towards department degree requirements.
Advising Expectations
The Department of Biochemistry is committed to providing academic advising in support of graduate student scholarly and professional development. When most effective, this advising relationship entails collaborative and sustained engagement by the advisor and the advisee. As a best practice, advising expectations should be periodically discussed and reviewed to ensure mutual understanding. Both the advisor and the advisee are expected to maintain professionalism and integrity.
Faculty advisors guide students in critical areas such as selecting courses, designing and conducting research, developing teaching pedagogy, navigating policies and degree requirements, and exploring academic opportunities and professional pathways.
Graduate students are active contributors to the advising relationship, proactively seeking academic and professional guidance and taking responsibility for informing themselves of policies and degree requirements for their graduate program.
See Graduate Advising for a statement of university policy on graduate advising.
Learning Outcomes
Program Learning Outcomes
The Department of Biochemistry focuses on the molecular basis of life by studying the structures and functions of proteins and nucleic acids, the control of development, molecular motors and the cytoskeleton, trafficking of proteins between organelles, regulation of gene expression, protein homeostasis, structure and design, genetic and epigenetic control of chromosome function, and the application of genomics, all toward the understanding of health and disease.